Neon Integration Guide

Technology: neon · Category: database · Last reviewed: 2026-08-23

Source: https://tech-stack.codeamanilabs.org/guide/neon

Insight:

Neon is serverless Postgres whose killer feature is branching — spin up an instant copy-on-write branch per preview deploy or migration test, then discard it. It scales to zero (cheap for spiky SME traffic) and supports pgvector for in-database vector search. Now Databricks-owned (it powers Databricks Lakebase), but the free-standing Neon platform, CLI, and MCP server remain the codeAmani path.

███╗   ██╗███████╗ ██████╗ ███╗   ██╗
████╗  ██║██╔════╝██╔═══██╗████╗  ██║
██╔██╗ ██║█████╗  ██║   ██║██╔██╗ ██║
██║╚██╗██║██╔══╝  ██║   ██║██║╚██╗██║
██║ ╚████║███████╗╚██████╔╝██║ ╚████║
╚═╝  ╚═══╝╚══════╝ ╚═════╝ ╚═╝  ╚═══╝

Neon Integration Guide

Focus: Managing serverless Postgres, running migrations, and using branching workflows from Claude Code via the official Neon MCP server.

Overview

Neon is a serverless Postgres platform (acquired by Databricks in 2025; it now also powers Databricks Lakebase) with scale-to-zero, database branching, and instant provisioning. Its official MCP server lets Claude Code create projects, run SQL, branch databases per feature, apply migrations safely with a two-phase commit pattern, inspect a database's health, and query slow query logs — all from natural language inside your session.

Here is the branching workflow at a glance — copy-on-write branches let you experiment freely, then discard or reset with zero risk to main:

flowchart LR
    A["main branch<br/>production data"] -->|"create_branch"| B["feature branch<br/>copy-on-write"]
    B --> C["run SQL · test migration"]
    C --> Q1{"Looks good?"}
    Q1 -->|"yes"| D["merge changes to main"]
    Q1 -->|"no"| E["reset_from_parent<br/>or delete_branch"]
    E --> B

Official Documentation

Resource URL
Neon Docs https://neon.com/docs
Neon MCP Server https://neon.com/docs/ai/neon-mcp-server
Branching Guide https://neon.com/docs/introduction/branching
Neon CLI https://neon.com/docs/reference/neon-cli
Connection Strings https://neon.com/docs/connect/connect-from-any-app

MCP Server Setup

Neon's preferred approach is the hosted remote server — no API keys to manage. The hosted server speaks Streamable HTTP at https://mcp.neon.tech/mcp (the older /sse endpoint is deprecated and returns 410 Gone on or after 2026-10-01).

# Add via Claude Code CLI (HTTP + OAuth)
claude mcp add --transport http neon https://mcp.neon.tech/mcp

After adding, run /mcp inside Claude Code to authenticate via OAuth. (npx neon@latest init also scaffolds the MCP config for most editors if you prefer a guided setup.)

.mcp.json Configuration (Remote)

{
  "mcpServers": {
    "neon": {
      "type": "http",
      "url": "https://mcp.neon.tech/mcp"
    }
  }
}

The MCP server is for development/testing only — never point it at a production database. Restrict scope by appending URL parameters to the MCP URL:

Parameter Effect
?readonly=true SELECTs + schema inspection only; branch/migration/auth writes disabled (OAuth can also grant read-only scope at authorize time)
?projectId=<id> Scope every operation to one project; cross-project search off
?category=<name> Enable only named tool categories (repeatable), e.g. ?category=querying&category=schema

Verify which tools a config exposes without authenticating: curl "https://mcp.neon.tech/api/list-tools?readonly=true&category=querying".

Local stdio fallback (deprecated npm package → use mcp-remote)

The old local package @neondatabase/mcp-server-neon is deprecated (npm marks it so). If your client only supports stdio servers, bridge to the hosted Streamable-HTTP server with mcp-remote instead:

{
  "mcpServers": {
    "neon": {
      "command": "npx",
      "args": [
        "-y", "mcp-remote@latest", "https://mcp.neon.tech/mcp",
        "--header", "Authorization:${NEON_AUTH_HEADER}"
      ],
      "env": { "NEON_AUTH_HEADER": "Bearer ${NEON_API_KEY}" }
    }
  }
}

Drop the --header/env lines to use interactive OAuth instead of an API key.

Available MCP Tools

Tools are grouped into categories (projects, branches, schema, querying, neon_auth, data_api, observability, docs) — filter with ?category=. The commonly used ones:

Tool Description
list_projects / list_organizations List Neon projects / orgs
create_project / delete_project Create or delete a Neon project
describe_project Project details incl. branch list + endpoint defaults
run_sql Execute a SQL query on a branch
run_sql_transaction Run multiple SQL statements as a transaction
get_database_tables List all tables in a database
describe_table_schema Get column definitions and constraints
create_branch Create a database branch (copy-on-write)
describe_branch Deep view of a branch (schema objects, etc.)
delete_branch Delete a branch
reset_from_parent Reset a branch to match parent state
compare_database_schema Diff a branch's schema against its parent
list_branch_computes Per-compute suspend timeout / CU / state (cost diagnosis)
get_connection_string Get psql/prisma/drizzle connection string (pooled optional)
prepare_database_migration Stage a migration on a test branch
complete_database_migration Apply staged migration to main branch
inspect_database Run the 14 read-only health checks from neon inspect db
list_slow_queries Get slow query log for analysis
prepare_query_tuning / complete_query_tuning Test + apply index/query fixes on a branch
explain_sql_statement Get EXPLAIN (ANALYZE) output
list_docs_resources / get_doc_resource Look up Neon docs from the assistant (no OAuth)

There is no standalone list_branches tool — branches come back from describe_project.


CLI Integration

Installation

npm i -g neon      # CLI is invoked as `neon`; `neonctl` is a published alias (same binary)

The examples below use neonctl; every command works identically as neon. In agentic/CI contexts prefer npx neon ... (or npx neonctl ...) rather than assuming a global install.

Authentication

neonctl auth       # OAuth browser login
# Or use API key (CI/scripts):
export NEON_API_KEY=...

Key Commands

# Projects
neonctl projects list
neonctl projects create --name my-project
neonctl projects delete PROJECT_ID

# Branches
neonctl branches list --project-id PROJECT_ID
neonctl branches create --project-id PROJECT_ID --name feature/auth
neonctl branches delete BRANCH_ID --project-id PROJECT_ID
neonctl branches reset BRANCH_ID --project-id PROJECT_ID --parent

# Connection string
neonctl connection-string --project-id PROJECT_ID --branch main
neonctl connection-string --project-id PROJECT_ID --branch feature/auth

# SQL execution
neonctl sql --project-id PROJECT_ID --query "SELECT version();"
neonctl sql --project-id PROJECT_ID --file schema.sql

Connecting to Postgres

Get Connection String

# Via MCP tool: get_connection_string
# Or via CLI:
neonctl connection-string --project-id PROJECT_ID --branch main

Example connection string:

postgresql://user:password@ep-cool-name-123456.us-east-2.aws.neon.tech/neondb?sslmode=require

Prisma Integration

npm install prisma @prisma/client

prisma/schema.prisma:

datasource db {
  provider = "postgresql"
  url      = env("DATABASE_URL")
  // Use a separate direct URL for migrations (no connection pooling)
  directUrl = env("DIRECT_URL")
}

generator client {
  provider = "prisma-client-js"
}
npx prisma migrate dev --name add-users
npx prisma generate

Drizzle ORM Integration

npm install drizzle-orm pg drizzle-kit
import { drizzle } from "drizzle-orm/node-postgres";
import { Pool } from "pg";

const pool = new Pool({ connectionString: process.env.DATABASE_URL });
const db = drizzle(pool);

// Query
const users = await db.select().from(usersTable).limit(10);

pgvector on Neon

Neon ships the pgvector extension, so you can store embeddings and run nearest-neighbour search inside the same Postgres branch as the rest of your data — no separate vector database to provision. This pairs naturally with the AI routing policy: generate embeddings with Anthropic/OpenAI/HuggingFace, then query them here.

Here is the end-to-end flow from raw text to a ranked similarity result:

flowchart LR
    A["app text"] -->|"embeddings API"| B["vector float array"]
    B --> C["INSERT into items.embedding"]
    C --> D["HNSW index"]
    D -->|"query vector + ORDER BY + LIMIT"| E["top-k nearest rows"]

Enable the extension, create a table + HNSW index

Run this on a branch first (use create_branch) so you can validate before touching main:

-- 1. Enable pgvector
CREATE EXTENSION IF NOT EXISTS vector;

-- 2. Table with a vector column.
--    Dimension must match your embedding model:
--    OpenAI text-embedding-3-small = 1536, Cohere embed-v3 = 1024, etc.
CREATE TABLE items (
  id        BIGSERIAL PRIMARY KEY,
  content   TEXT,
  embedding VECTOR(1536)
);

-- 3. HNSW index. Pick the operator class that matches your distance metric:
--    vector_cosine_ops (cosine), vector_l2_ops (L2), vector_ip_ops (inner product).
--    Cosine is the usual choice for normalized OpenAI/Cohere embeddings.
CREATE INDEX ON items
  USING hnsw (embedding vector_cosine_ops)
  WITH (m = 16, ef_construction = 64);

Nearest-neighbour query

Use the distance operator that matches the index operator class: <=> (cosine), <-> (L2), <#> (negative inner product). The index is only used when the query has both ORDER BY on the distance operator and a LIMIT:

SELECT id, content
FROM items
ORDER BY embedding <=> '[0.012, -0.034, 0.567, ...]'   -- your query embedding
LIMIT 5;

From TypeScript (Drizzle + a query embedding)

import { drizzle } from "drizzle-orm/node-postgres";
import { sql } from "drizzle-orm";
import { Pool } from "pg";

const pool = new Pool({ connectionString: process.env.DATABASE_URL });
const db = drizzle(pool);

// queryEmbedding is a number[] from your embeddings provider (e.g. 1536-dim).
async function searchSimilar(queryEmbedding: number[], k = 5) {
  // pgvector accepts the array as a bracketed string literal: '[0.1,0.2,...]'
  const literal = `[${queryEmbedding.join(",")}]`;
  const rows = await db.execute(sql`
    SELECT id, content
    FROM items
    ORDER BY embedding <=> ${literal}
    LIMIT ${k}
  `);
  return rows.rows;
}

Gotcha — HNSW dimension ceiling. An HNSW index on the standard vector type supports at most 2,000 dimensions. Models that exceed this (e.g. OpenAI text-embedding-3-large at 3072 dims) cannot be indexed as vector — use the halfvec type instead (16-bit floats, up to 4,000 dimensions indexed): CREATE INDEX ON items USING hnsw ((embedding::halfvec(3072)) halfvec_cosine_ops);. Without an HNSW index, large-dimension columns still work for storage and exact search, just without ANN acceleration.

See the pgvector on Neon guide for index tuning (ef_search), IVFFlat as an alternative index, and the full operator/type matrix.


Environment Variables

# Connection strings (from Neon dashboard or neonctl connection-string)
DATABASE_URL=postgresql://user:pass@ep-....neon.tech/neondb?sslmode=require
DIRECT_URL=postgresql://user:pass@ep-....neon.tech/neondb?sslmode=require

# API key (for CLI and npm MCP package)
NEON_API_KEY=...

# Project and branch (optional, for scripting)
NEON_PROJECT_ID=...
NEON_BRANCH_NAME=main

Automation Workflows

Safe Two-Phase Migration Pattern

Neon's MCP server implements a safe migration pattern that tests first on a branch:

You can apply schema changes with confidence — the migration is rehearsed on a throwaway branch before it ever touches main:

sequenceDiagram
    participant CC as Claude Code
    participant Neon as Neon MCP
    CC->>Neon: prepare_database_migration
    Neon->>Neon: create test branch · run migration
    Neon-->>CC: result for review
    CC->>CC: check for errors and data issues
    CC->>Neon: complete_database_migration
    Neon->>Neon: apply migration to main branch
    Neon-->>CC: migration confirmed
  1. Claude Code calls prepare_database_migration → creates a test branch, runs migration there
  2. Review the output — Claude Code checks for errors and data issues
  3. Call complete_database_migration → applies the migration to the main branch

This prevents irreversible migrations from running against production directly.

In practice, ask Claude Code:

"Apply this migration to the Neon database: ALTER TABLE users ADD COLUMN avatar_url TEXT"

Claude Code will automatically use the two-phase pattern via the MCP tools.

Claude Code Slash Command: Branch per Feature

.claude/commands/neon-branch.md:

Create a Neon database branch for feature $ARGUMENTS.

1. Use the Neon MCP tool `create_branch` to create a branch named "feature/$ARGUMENTS"
2. Use `get_connection_string` to get the connection string for this branch
3. Update the `.env.local` file's DATABASE_URL to point to the new branch
4. Report the branch ID, connection string, and confirm `.env.local` was updated

Usage: /project:neon-branch user-auth

GitHub Actions: Branch per PR

# .github/workflows/neon-preview.yml
name: Neon Preview Branch
on:
  pull_request:
    types: [opened, synchronize]

jobs:
  create-branch:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4
      - name: Create Neon branch
        uses: neondatabase/create-branch-action@v6
        id: create-branch
        with:
          project_id: ${{ secrets.NEON_PROJECT_ID }}
          api_key: ${{ secrets.NEON_API_KEY }}
          branch_name: preview/pr-${{ github.event.pull_request.number }}
      - name: Comment branch URL
        uses: actions/github-script@v7
        with:
          script: |
            github.rest.issues.createComment({
              issue_number: context.issue.number,
              owner: context.repo.owner,
              repo: context.repo.repo,
              body: `DB branch id: \`${{ steps.create-branch.outputs.branch_id }}\`\nConnection: \`${{ steps.create-branch.outputs.db_url_pooled }}\``
            })

Common Use Cases

Use Case Approach
Feature branch isolation MCP create_branch per PR
Safe schema migrations Two-phase: prepare → complete
Query analysis MCP explain_sql_statement + list_slow_queries
Database health check MCP inspect_database (14 read-only checks)
Guided query tuning MCP prepare_query_tuning → complete_query_tuning
Instant dev environment create_project in under 2 seconds
Prisma migrations prisma migrate dev against branch URL
Reset dev DB MCP reset_from_parent

Troubleshooting

Issue Fix
Connection timeout Add ?sslmode=require&connect_timeout=10 to URL
Branch creation fails Check project branch limit (free tier: 10 branches)
Slow queries Use MCP list_slow_queries + explain_sql_statement
Migration conflicts Reset branch with MCP reset_from_parent
Prisma P1001 Endpoint may be sleeping — first query wakes it (scale-to-zero)
API key invalid Regenerate at console.neon.tech → Account Settings

Official docs: